publications

2026

  1. isodde.svg
    Accurate Predictions of Novel Biomolecular Interactions with IsoDDE
    Isomorphic Labs Team
    Feb 2026
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2025

  1. ICRL.jpg
    Can LLMs Reason Over Non-Text Modalities in a Training-Free Manner? A Case Study with In-Context Representation Learning
    Tianle Zhang*, Wanlong Fang*, Jonathan Woo*, Paridhi Latawa, Deepak A Subramanian, and Alvin Chan
    Dec 2025
    2025 Conference on Neural Information Processing Systems (NeurIPS)
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  2. Adaptive xTB.svg
    Adaptive xTB
    Jonathan Woo
    Jul 2025
    Undergraduate Thesis
    PDF
  3. COMET.jpg
    Designing Lipid Nanoparticles Using a Transformer-Based Neural Network
    Alvin Chan*, Ameya R Kirtane*, Qing Rui Qu, Xisha Huang, Jonathan Woo, Deepak A Subramanian, Rajib Dey, Rika Semalty, Joshua D Bernstock, Taksim Ahmed, and others
    Jun 2025
    Nature Nanotechnology
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